Academic Thesis

Basic information

Name Kojima Isshu
Belonging department
Occupation name
researchmap researcher code R000055330
researchmap agency Okayama University of Science

Title

Newly-designed primer pairs for the detection of type 2 porcine reproductive and respiratory syndrome virus genes.

Bibliography Type

Joint Author

Author

Wataru Fukunaga/Yuiko Hayakawa-Sugaya/Fumiko Koike/Nguyen Van Diep/Isshu Kojima/Yuuhei Yoshida/Yasuo Suda/Tatsunori Masatani/Makoto Ozawa

Summary

Porcine reproductive and respiratory syndrome (PRRS) is an infectious disease, caused by PRRS virus (PRRSV), that critically affects the swine industry. While the detection of PRRSV genes plays a key role in PRRS control, the PRRSV genome is known to undergo frequent mutation. Nevertheless, primer pairs widely used for the detection of PRRSV genes were designed between 1995 and 2010. The reliability of these primer pairs for the detection of currently circulating PRRSVs is therefore questionable. Here, we investigated the sensitivity of the previously reported primer pairs to detect PRRSV genes that have been recently isolated or detected in Japan. In addition, based on nucleotide sequences from the recent Japanese PRRSVs, we designed four new primer pairs for the detection of PRRSV genes. The sensitivity and specificity of the new primer pairs were evaluated by quantitative reverse transcription PCR using RNA extracted from PRRSV isolates, swine serum, and oral fluid specimens collected from PRRS-affected pigs, and swine sera collected from a PRRSV-free pig farm in Japan. One of novel primer pairs used in our study exhibited greater sensitivity than the previously reported primer pairs, and is thus more reliable for the detection of PRRSV genes.

Magazine(name)

Journal of virological methods

Publisher

Volume

291

Number Of Pages

StartingPage

114071

EndingPage

114071

Date of Issue

2021/05

Referee

Exist

Invited

Language

English

Thesis Type

Research papers (academic journals)

ISSN

DOI

10.1016/j.jviromet.2021.114071

NAID

PMID

J-GLOBAL ID

arXiv ID

ORCID Put Code

DBLP ID