Academic Thesis

Basic information

Name Yagi Yoichiro
Belonging department
Occupation name
researchmap researcher code 1000229028
researchmap agency Okayama University of Science

Title

FMO calculations on complexes of metalloprotein and organic compounds: I

Bibliography Type

Sole Author

Author

Yoichiro YAGI

Summary

It is known that tyrosinase is an enzyme responsible for melanin production and has two metal ions(copper ions or zinc ions) in its active site. In this study, we performed an FMO calculation with FMO2-MP2/6-31G revel for tyrosinase-tyrosine complex and computed the inter-fragment interaction energies (IFIEs) among tyrosine, zinc ions, water molecule, and the amino acid residues in tyrosinase. We aim to obtain detailed knowledge on the enzymatic reaction mechanism of tyrosinase through the IFIE analysis. The FMO computations show that tyrosine binds to tyrosinase via two zinc ions. We also found that the water molecule strongly binds to tyrosinase via two zinc ions. These results show that two zinc ions and water molecule are considered to play an important role in the oxidation reaction of tyrosine.

Magazine(name)

The Bulletin of Institute of Frontier Science and Technology

Publisher

岡山理科大学 フロンティア理工学研究所

Volume

Number Of Pages

第4号

StartingPage

17

EndingPage

19

Date of Issue

2022/12

Referee

Not exist

Invited

Not exist

Language

Japanese

Thesis Type

Research papers (publications of university or research institution)

ISSN

DOI

NAID

PMID

URL

J-GLOBAL ID

arXiv ID

ORCID Put Code

DBLP ID