Competitive research funds

Basic information

Name Kido Yoshiyuki
Belonging department
Occupation name
researchmap researcher code B000242986
researchmap agency Okayama University of Science

Title

A study of gene regulatory networks analysis on distributed and parallel computers using work steal method

Provider

Japan Society for the Promotion of Science

System

Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (B)

From Date

2012-04

To Date

2016-03

OwnerRole

Principal Investigator

Author

Kido Yoshiyuki

Category

Grant-in-Aid for Young Scientists (B)

Summary

In this research, we have developed and implemented a job scheduler framework with work steal mechanism for large scale gene regulatory networks analysis. The analysis applications usually execute on a distributed and parallel computational environment. Because a whole of human genes is a approximate 20,000, therefore a human gene regulatory networks analysis needs large scale computational environment. So, our products aims to reduce a calculation time of gene regulatory networks analysis using work steal mechanism. A work steal mechanism is able to cut off a useless network estimation.
We also have modified and improved a network visualization application for large scale gene regulatory networks on a high resolution visualization system (i.e. tiled display wall).

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