Academic Thesis

Basic information

Name Nakamura Motonao
Belonging department
Occupation name
researchmap researcher code 6000014705
researchmap agency Okayama University of Science

Title

Na+-mimicking ligands stabilize the inactive state of leukotriene B4 receptor BLT1

Bibliography Type

Author

Hori,T., Okuno,T., Hirata,K., Yamashita,K., Kawano,Y., Yamamoto,M., Hato,M., Nakamura,M., Shimizu,T., Yokomizo,T., Miyano,M. and Yokoyama,S.

Summary

Most G-protein-coupled receptors (GPCRs) are stabilized in common in the inactive state by the formation of the sodium ion–centered water cluster with the conserved Asp2.50 inside the seven-transmembrane domain. We determined the crystal structure of the leukotriene B4 (LTB4) receptor BLT1 bound with BIIL260, a chemical bearing a benzamidine moiety. Surprisingly, the amidine group occupies the sodium ion and water locations, interacts with D662.50, and mimics the entire sodium ion–centered
water cluster. Thus, BLT1 is fixed in the inactive state, and the transmembrane helices cannot change their conformations to form the active state. Moreover, the benzamidine molecule alone serves as a negative allosteric modulator for BLT1. As the residues involved in the benzamidine binding are widely conserved among GPCRs, the unprecedented inverse-agonist mechanism by the benzamidine moiety could be adapted to other GPCRs. Consequently, the present structure will enable the rational development of inverse agonists specific for each GPCR.

Magazine(name)

Nature Chem.Biol.

Publisher

Nature Chem.Biol.

Volume

Number Of Pages

StartingPage

EndingPage

Date of Issue

2018/01

Referee

Exist

Invited

Language

English

Thesis Type

Research papers (academic journals)

ISSN

DOI

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PMID

URL

J-GLOBAL ID

arXiv ID

ORCID Put Code

DBLP ID