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Name Koga Yuuichi
Belonging department
Occupation name
researchmap researcher code 5000076449
researchmap agency Okayama University of Science

Title

Conformational contagion in a protein: Structural properties of a chameleon sequence

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Author

Kazufumi Takano
Yoshiaki Katagiri
Atsushi Mukaiyama
Hyongi Chon
Hiroyoshi Matsumura
Yuichi Koga
Shigenori Kanaya

Summary

Certain sequences, known as chameleon sequences, take both alpha - and beta-conformations in natural proteins. We demonstrate that a wild chameleon sequence fused to the C-terminal alpha-helix or beta-sheet in foreign stable proteins fiom hyperthemophiles forms the same conformation as the host secondary structure. However, no secondary structural formation is observed when the sequence is attached to the outside of the secondary structure. These results indicate that this sequence inherently possesses an ability to make eitherocor fl-conformation, dq,ending on the sequentially neighboring secondary structure if little other nonlocal interaction occurs. Thus, chameleon sequences take on a satellite state through contagion by the power of a secondary structure. We propose this "conformational contagion" as a new nonlocal determinant factor in protein structure and misfolding related to protein conformational diseases.

Magazine(name)

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Publisher

WILEY-LISS

Volume

68

Number Of Pages

3

StartingPage

617

EndingPage

625

Date of Issue

2007-08

Referee

Not exist

Request

Not exist

Language

English

Posting type

 

ISSN

 

DOI

10.1002/prot.21451

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